The following files are uploaded as part of an upcoming Milk Peptidomics protocol in Methods in Molecular Biology (Springer).
Standard peptide settings file: Standard_peptide_settings.skys
Standard peptidomics output file: Peptidomics_standard_output.skyr
Protein library files
Human milk protein library: HumanMilkProteinDatabase.fasta
Cow milk protein library: CowMilkProteinDatabase.fasta
Pig milk protein library: PigMilkProteinDatabase.fasta
Skyline Output Enhancement
Link to Evan Parker's Enzyme Predictor software
Milk Bioactive Peptide Database
Click here for the Milk Bioactive Peptide Database.